RRH

RRH
Identifiers
Aliases	RRH, retinal pigment epithelium-derived rhodopsin homolog
External IDs	OMIM: 605224 MGI: 1097709 HomoloGene: 55977 GeneCards: RRH
Gene location (Human)
Chr.	Chromosome 4 (human)[1]
End	109,849,123 bp[1]
Gene location (Mouse)
Chr.	Chromosome 3 (mouse)[2]
End	129,616,236 bp[2]
RNA expression pattern
	Top expressed in
	retinal pigment epithelium; ; sural nerve; ; cerebellar hemisphere; ; caudate nucleus; ; Brodmann area 9; ; left coronary artery;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	photoreceptor activity; signal transducer activity; G protein-coupled receptor activity; G protein-coupled photoreceptor activity;
Cellular component	integral component of membrane; integral component of plasma membrane; membrane; photoreceptor outer segment;
Biological process	protein-chromophore linkage; signal transduction; response to stimulus; visual perception; G protein-coupled receptor signaling pathway; phototransduction; detection of visible light; cellular response to light stimulus;
	Sources:Amigo / QuickGO
Orthologs
	10692
	20132
	ENSG00000180245
	ENSMUSG00000028012
	O14718
	O35214
	NM_006583
	NM_009102
	NP_006574
	NP_033128
	Wikidata
View/Edit Human	View/Edit Mouse

Peropsin, a visual pigment-like receptor, is a protein that in humans is encoded by the RRH gene.[5][6] It is an opsin and so belongs to the G protein-coupled receptors. Peropsin genes have seven-exons as neuropsin and RGR-opsin genes.[6]

Phylogeny

The peropsins are one of the four subgroups of the Go/RGR opsins, also known as RGR/Go or Group 4 opsins. Go/RGR opsins are one of the four major groups of type-II opsins, also known as metazoan or animal opsins. The Go/RGR opsins consist of four groups: The Go-opsins, the RGR-opsins, the peropsins, and the neuropsins. Animal opsins belong to four classes: C-opsins (ciliary), R-opsins (rhabdomeric), Cnidops (cnidarian), and Go/RGR-opsins. Three of these subclades occur only in Bilateria (all but Cnidops). However, the bilaterian clades constitute a parphyletic taxon without the Cnidops.[7][8]

References

GRCh38: Ensembl release 89: ENSG00000180245 - Ensembl, May 2017
GRCm38: Ensembl release 89: ENSMUSG00000028012 - Ensembl, May 2017
"Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
"Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
Sun H, Gilbert DJ, Copeland NG, Jenkins NA, Nathans J (Sep 1997). "Peropsin, a novel visual pigment-like protein located in the apical microvilli of the retinal pigment epithelium". Proceedings of the National Academy of Sciences of the United States of America. 94 (18): 9893–8. Bibcode:1997PNAS...94.9893S. doi:10.1073/pnas.94.18.9893. PMC 23288. PMID 9275222.
"Entrez Gene: RRH retinal pigment epithelium-derived rhodopsin homolog".
Porter ML, Blasic JR, Bok MJ, Cameron EG, Pringle T, Cronin TW, Robinson PR (Jan 2012). "Shedding new light on opsin evolution". Proceedings of the Royal Society B: Biological Sciences. 279 (1726): 3–14. doi:10.1098/rspb.2011.1819. PMC 3223661. PMID 22012981.
Liegertová M, Pergner J, Kozmiková I, Fabian P, Pombinho AR, Strnad H, Pačes J, Vlček Č, Bartůněk P, Kozmik Z (2015). "Cubozoan genome illuminates functional diversification of opsins and photoreceptor evolution". Scientific Reports. 5: 11885. Bibcode:2015NatSR...511885L. doi:10.1038/srep11885. PMC 5155618. PMID 26154478.

Harrington JJ, Sherf B, Rundlett S, Jackson PD, Perry R, Cain S, Leventhal C, Thornton M, Ramachandran R, Whittington J, Lerner L, Costanzo D, McElligott K, Boozer S, Mays R, Smith E, Veloso N, Klika A, Hess J, Cothren K, Lo K, Offenbacher J, Danzig J, Ducar M (May 2001). "Creation of genome-wide protein expression libraries using random activation of gene expression". Nature Biotechnology. 19 (5): 440–5. doi:10.1038/88107. PMID 11329013. S2CID 25064683.
Bellingham J, Wells DJ, Foster RG (Jan 2003). "In silico characterisation and chromosomal localisation of human RRH (peropsin)--implications for opsin evolution". BMC Genomics. 4 (1): 3. doi:10.1186/1471-2164-4-3. PMC 149353. PMID 12542842.
Barrios-Rodiles M, Brown KR, Ozdamar B, Bose R, Liu Z, Donovan RS, Shinjo F, Liu Y, Dembowy J, Taylor IW, Luga V, Przulj N, Robinson M, Suzuki H, Hayashizaki Y, Jurisica I, Wrana JL (Mar 2005). "High-throughput mapping of a dynamic signaling network in mammalian cells". Science. 307 (5715): 1621–5. Bibcode:2005Sci...307.1621B. doi:10.1126/science.1105776. PMID 15761153. S2CID 39457788.
Rivolta C, Berson EL, Dryja TP (2007). "Mutation screening of the peropsin gene, a retinal pigment epithelium specific rhodopsin homolog, in patients with retinitis pigmentosa and allied diseases". Molecular Vision. 12: 1511–5. PMID 17167409.

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000180245 - Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000028012 - Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid9275222-5] Sun H, Gilbert DJ, Copeland NG, Jenkins NA, Nathans J (Sep 1997). "Peropsin, a novel visual pigment-like protein located in the apical microvilli of the retinal pigment epithelium". Proceedings of the National Academy of Sciences of the United States of America. 94 (18): 9893–8. Bibcode:1997PNAS...94.9893S. doi:10.1073/pnas.94.18.9893. PMC 23288. PMID 9275222.

[entrez-6] "Entrez Gene: RRH retinal pigment epithelium-derived rhodopsin homolog".

[Porter_2011-7] Porter ML, Blasic JR, Bok MJ, Cameron EG, Pringle T, Cronin TW, Robinson PR (Jan 2012). "Shedding new light on opsin evolution". Proceedings of the Royal Society B: Biological Sciences. 279 (1726): 3–14. doi:10.1098/rspb.2011.1819. PMC 3223661. PMID 22012981.

[Liegertová_2015-8] Liegertová M, Pergner J, Kozmiková I, Fabian P, Pombinho AR, Strnad H, Pačes J, Vlček Č, Bartůněk P, Kozmik Z (2015). "Cubozoan genome illuminates functional diversification of opsins and photoreceptor evolution". Scientific Reports. 5: 11885. Bibcode:2015NatSR...511885L. doi:10.1038/srep11885. PMC 5155618. PMID 26154478.

RRH

Phylogeny

References

Further reading